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Table 1 Data and refinement statistics

From: The crystal structures of PKG Iβ (92-227) with cGMP and cAMP reveal the molecular details of cyclic-nucleotide binding

Data set

cGMP bound

cAMP bound

Partial APO

Space group

P6 2 22

P6 2 22

P4 3

Cell constants (Å)

a=b=107, c=171

α=β=90.0, γ=120

a=b=107, c=169

α=β=90.0, γ=120

a=b=62.6, c=202

α=β=γ=90.0

Wavelength (Å)

1.0

1.0

1.0

Resolution (Å)

50 – 2.9

50 – 2.49

45-2.75

Total/unique reflections

402498/13503

293611/20607

80424/19782

Average redundancy

29.8(20.2)

13.8(14.2)

4.1(4.1)

Completeness (%)

100(100)

98.7(99.6)

100(99.6)

<I>/<σI>

21.2(2.10)

43.5(5.62)

31.2 (2.39)

Rsym (%)

13.5(n/a)

10.1(42.4)

5.9(46.4)

Rwork (%)

20.4

20.6

18.0

Rfree (%)

26.0

23.0

25.1

Overall B value( Å2)

73.4

46.6

94.4

Rmsd bond length (Å)

0.010

0.014

0.005

Rmsd bond angle(°)

1.42

1.274

0.942

  1. Rsym = ∑ h i |I(h) - I(h) i |I h i I(h) i , where I(h) is the mean intensity after rejections.
  2. §Numbers in parentheses correspond to the highest resolution shell of data, which were 2.98 to 2.90 for the cGMP, 2.53 to 2.49 Å for the cAMP and 2.85 to 2.75Å for APO.
  3. ||Rwork = ∑ h ||Fobs(h)| -|Fcalc(h)||I h |Fobs(h)|; no I/σ cutoff was used during refinement.
  4. 5.0% of the observed intensities was excluded from refinement for cross validation purposes.